· Delarue web servers
· PDB_Hydro Flow chart
· Modify PDB structures
  · Change sequence (decorate)
  · Fix missing side chains
  · Single point mutations
  · Flip HNQ side chains
  · Generate loops
  · Refine sidechain torsions
· Solvate PDB structures
  · Build polar H's & charges
  · Solvate using GPBL
  · Place Waters
  · All in one
· NEW !!! AQUASOL !!!
  · Run wwwAquaSol
· References
· Homes/Links
· Job queue status

Mutate & Solvate

This site provides tools for mutating and solvating PDB files using new methodologies developed recently in the lab.
It identifies strongly and poorly solvated exposed surfaces on proteins (see Figure below) and helps identify potential protein-interaction zones.

Pick a choice in the menu to the left and play around with it - things are still in development.

If you find this site useful, please cite this Reference.

  Marc Delarue http://lorentz.dynstr.pasteur.fr
Page last modified 09:38 December 20, 2010.