· Introduction
· NOMAD-Ref web server
· PDB_Hydro web server
· MinActionPath web server
· References
· Homes & Links
· Job queue status
· Main site

Introduction

This site provides online servers for algorithms such as normal mode calculation, structural refinement, solvation, and mutation. The primary application is for biological macromolecules like proteins or DNA, but they can certainly be used for general structures.

2008

MinActionPath was updated to accept up to 4000 atoms thanks to Patrice Koehl. However, this version is still not on the web. Please send an e-mail to me (delarue@pasteur.fr) if you are interested.

2007

MinActionPath web server: Generate trajectories between two known structural forms.

2006

NOMAD-Ref web server:
Normal Mode Analysis, Deformation and Refinement PDB_Hydro web server:
Mutation & Solvation applications Generalized Poisson-Boltzmannn

Marc Delarue

http://lorentz.immstr.pasteur.fr
Page last modified 18:19 November 21, 2008.